PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1505
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GeBP
Protein Properties Length: 257aa    MW: 28493.5 Da    PI: 4.5044
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1505genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57333.41.2e-1028113997
                         DUF573   9 eeDeivlLqGlidfkaktgk.spsd.didafyefvkksisfkvsk.sqlveKirrLKkKfkkkvkkaksgkepsfskehd 85 
                                    +eD i +L+++i+f+ak+g   p+   +d +++ +k+s++ +  + + l ++ r+LK+K+++  k+       +  ++ d
  evm.model.AsparagusV1_06.1505  28 QEDAIKILKAVIEFRAKNGGsIPTPtTMDPVFRSLKGSLHEELRSvDHLYSRFRSLKEKYRRACKD------GVGPTDFD 101
                                    79***************9984566679**************98652779************99998......56678889 PP

                         DUF573  86 qkifelskkiWg 97 
                                    +  f+ls + W+
  evm.model.AsparagusV1_06.1505 102 RAFFDLSARAWD 113
                                    999999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MSPEPPASAQ AQAAGAAGAK AKSDENAQED AIKILKAVIE FRAKNGGSIP TPTTMDPVFR  60
SLKGSLHEEL RSVDHLYSRF RSLKEKYRRA CKDGVGPTDF DRAFFDLSAR AWDKEEAGTK  120
KKKKTTETKK AVTDVVTNAA DAGDDADDVH DGDEEEDENE EEVEEDDEEE NEDVADGYFM  180
YLSGQARKYW EQLGLPIATL EVGLKFLDRS KAAALEKKWM AHFEEGLKIE AQSHELYLEI  240
CSTLLGGLKR KRVDDD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120130KKKKKTTETKK