PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1813
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 167aa    MW: 18846.1 Da    PI: 5.4832
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1813genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-2052102155
                            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                    s y+GVr+++ +g+W+AeIrdp     +  r +lg+f+taeeAa+a+++a+ +++g
  evm.model.AsparagusV1_06.1813  52 SEYRGVRRRP-WGKWAAEIRDPL----KaVRKWLGTFDTAEEAARAYDKAAIEFRG 102
                                    569*******.**********73....46************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MDPTVISSFG SNSGCLGCEF FASGELIREV KSSSSSLIEP KIKKRRKKPK TSEYRGVRRR  60
PWGKWAAEIR DPLKAVRKWL GTFDTAEEAA RAYDKAAIEF RGARAKLNFP FPEQEQHQEK  120
ENENEPSDEL KFPTLSEGSS VEKETGEERT TVGLWDGLPD LFEIDF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14046PKIKKRR
24347KKRRK
34348KKRRKK
44360KKRRKKPKTSEYRGVRRR
54361KKRRKKPKTSEYRGVRRRP
64461KKRRKKPKTSEYRGVRRR
74462KKRRKKPKTSEYRGVRRRP
84563KKRRKKPKTSEYRGVRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.17e-21ERF family protein