PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1939
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 288aa    MW: 32253.4 Da    PI: 8.3406
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1939genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.71.9e-52111451128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...lelee........vikevdiykvePwdLpkkvkaeekewyfFskrdkkya 69 
                                    lppGfrFhP+d+el+++yL++kv +++       +        v+ +vd++k+ePwdLp  +  + kewyfF  rd+kya
  evm.model.AsparagusV1_06.1939  11 LPPGFRFHPRDDELICDYLNPKVLSSSsssG---DasatvnfpVMVDVDLNKCEPWDLPDIACVGGKEWYFFNLRDRKYA 87 
                                    79*********************99995550...3444555558***************6555689************** PP

                            NAM  70 tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    tg+r+nrat sgyWkatgkd+++++ kg++vg++ktLvfy+grapkg+ktdWvmhe+r+
  evm.model.AsparagusV1_06.1939  88 TGQRTNRATMSGYWKATGKDRQIIR-KGAVVGMRKTLVFYQGRAPKGKKTDWVMHEFRI 145
                                    ************************9.999****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MSYLSMVEAK LPPGFRFHPR DDELICDYLN PKVLSSSSSS GDASATVNFP VMVDVDLNKC  60
EPWDLPDIAC VGGKEWYFFN LRDRKYATGQ RTNRATMSGY WKATGKDRQI IRKGAVVGMR  120
KTLVFYQGRA PKGKKTDWVM HEFRIEGRGD LPPMYPGKED WVLCRVFYKS RGIGTPSKAP  180
TRIENSYDDT GSSSLPPLSE PYITFDQTLT PPPPPPPPIN SHDNNLSSDT TSFEQVPCFS  240
NYPHITTTTT TTPQHFINTL ALVERNKPSS CLTQSAPSSS MWYPFQS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.21e-89NAC family protein