PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1949
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 262aa    MW: 28826.6 Da    PI: 6.9712
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1949genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-10109153554
                                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                    h+++Er RR+ri +++  L+el+P+       K + a++L + v+Y+k L
  evm.model.AsparagusV1_06.1949 109 HSIAERLRRERIAERIRALQELVPST-----NKTDRAAMLDEIVDYVKFL 153
                                    99***********************7.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MANPPPDGMN DDFFDQIFSM PAAYGGGKRI RDDDQEVKRN PSEAEREHPV QLTSLFPPYG  60
HGQVHHIRPN PPPQVLHGQA LQGTMNVAPQ PPAPRPRVRA RRGQATDPHS IAERLRRERI  120
AERIRALQEL VPSTNKTDRA AMLDEIVDYV KFLRLQVKVL SMSRLGGAGA VAQLVADIPL  180
SSVEGGDTSD GRTTQQVWEK WSTDGTERQV AKLMEEDIGA AMQFLQSRAL CIMPISLAAA  240
IYHTHPQPES SSVKPEPNTP S*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114119RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.31e-58bHLH family protein