PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1997
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 135aa    MW: 15782.2 Da    PI: 5.3236
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1997genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM362e-111864248
                            NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                                   ppG +F Ptdee++ eyL+k++ ++kl++e+vikev++y+++  dL 
  evm.model.AsparagusV1_06.1997 18 PPGWKFLPTDEEIIFEYLHKRILNEKLPCEDVIKEVHLYELDIPDLA 64
                                   9***************************************9977775 PP
2NAM28.54.5e-096811185128
                            NAM  85 atgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                                    +t  ++e+ + +g+++g+k+tL fy g ++ + ++t+W+m ey++
  evm.model.AsparagusV1_06.1997  68 KTKLTTEIEH-NGKKIGVKNTLNFYWGlQQGENSRTEWMMREYSI 111
                                    5666778888.999***********887888889*********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MEVIENEGKG LQYVKKIPPG WKFLPTDEEI IFEYLHKRIL NEKLPCEDVI KEVHLYELDI  60
PDLATLRKTK LTTEIEHNGK KIGVKNTLNF YWGLQQGENS RTEWMMREYS IKEFQIPKEP  120
AGLEPHMKLD DAVL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.14e-13NAC family protein