PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_06.437

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

GRF

Protein Properties

Length: 244aa MW: 27758.2 Da PI: 9.4885

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_06.437	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.5	3.1e-25	83	126	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e evm.model.AsparagusV1_06.437 83 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 126 79***************************************997 PP
2	QLQ	63.3	6.3e-22	20	55	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+q+L++Q+l+yKy+a++ P+P++Ll++i++ evm.model.AsparagusV1_06.437 20 PFTPTQWQELEQQALIYKYMASGIPIPSDLLLPIKR 55 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MMNGGNSNNN NSYFNFSRYP FTPTQWQELE QQALIYKYMA SGIPIPSDLL LPIKRSSFLS 60 CPQPTAGWSF LQMGYGFGRK AEDPEPGRCR RTDGKKWRCS KEAYPDSKYC ERHMHRGKNR 120 SRKPVEISIN STSNKNSISP YPQLYPQSNS WELRPLGLGE PKQRQEKAEH CFVLGADFKN 180 QRPVKERDFF EGESSSLGSS SSSSSSYSKT QLSISIPMGL HDFTHWLVLI QSVQLLHNGR 240 CLE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-46	GRF family protein