PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.468
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YA
Protein Properties Length: 203aa    MW: 22626.8 Da    PI: 9.6289
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.468genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.73.9e-3387143158
                     CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                                   dep+YVNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRh hA++R+Rg gGrF
  evm.model.AsparagusV1_06.468  87 DEPIYVNAKQYNGILRRRQFRAKLEAQNKL-MKERKPYLHESRHLHAMKRERGAGGRF 143
                                   79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MIPPLQGDDN SHEKQVQVPL KPVFSLGTPE VVFEPPKIDY GQSIPCVPHP PADPYFGSIM  60
DAYGSHATMM GVGSSSRVPL PLEPAEDEPI YVNAKQYNGI LRRRQFRAKL EAQNKLMKER  120
KPYLHESRHL HAMKRERGAG GRFLNKKERQ QQFTSTENLN GSTTEARHSF ATSLNPHSGG  180
ENMGVWGGMI LNGSCQRVFV MR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17590.23e-37NF-YA family protein