PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.588
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 258aa    MW: 28676.9 Da    PI: 6.7869
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.588genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.7e-10169212755
                                   HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   ++ ++RR+ri +++  L++l+P+      +K++ +++LekA+ Y+k Lq
  evm.model.AsparagusV1_06.588 169 IAAKNRRERISERLKVLQDLVPNG-----TKVDLVTMLEKAISYVKFLQ 212
                                   5679******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MALAKERIRQ NSQSSFSQGI DPSTIEFFGS ESHIPISNFA FMNALPYEAQ SSARVNNWAY  60
TNSSLLSFEQ SKLDNEEACA LWIDSMDHDQ YGSNCANSRS LSQDYGEDRF GFLYPDSSSM  120
DSVQDSGEVE RSSQKRPYMS GDVQVSKKLC GNNKKAKAKP SPSKDPQSIA AKNRRERISE  180
RLKVLQDLVP NGTKVDLVTM LEKAISYVKF LQLQVKVLAT DEFWPAQGGR APEIAQVKEA  240
IDAILSSHRD RNSSSKQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.12e-53bHLH family protein