PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.635
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 205aa    MW: 23730.4 Da    PI: 5.8921
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.635genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.21.6e-071357346
                                  SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
               Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                                  +WT+   + + +a + +  +   +W  Iar +g  R+ +++k ++q 
  evm.model.AsparagusV1_06.635 13 PWTAKQNKMFEQALAVYDQEtpdRWQNIARAVG--RSVEDVKRHYQL 57
                                  8*****************99************8..**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MASSSLPHSS GSPWTAKQNK MFEQALAVYD QETPDRWQNI ARAVGRSVED VKRHYQLLEE  60
DVRHIESGNV PFPYVQSSRV EPDMMNRAHP SHLFLFNQQL TLSSEMDSWT AEQNKHFEQV  120
LAVYDKDTPD RWQNVAREIG KSVEDVKRQY RLLQEDIKYI ESANFPSFGA CARARDEEQR  180
YNIITKQLAQ PFSSSSVTYI IYDH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.15e-28MYB_related family protein