PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_06.639

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 254aa MW: 28966.5 Da PI: 6.1717

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_06.639	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.9	2.9e-51	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratk 79 lppGf FhPtd el+++yLk k+ g+k++l ++i+e+diyk+ePwdLp+ +v +++++w+fF++rdkky++g+r+nrat+ evm.model.AsparagusV1_06.639 9 LPPGFGFHPTDVELISHYLKGKLLGRKIDL-DIIPEIDIYKHEPWDLPArcQVPTRDSKWHFFASRDKKYPNGSRSNRATA 88 79**************************.99***********6346667999******************* PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +gyWk+tgkd+++ + k++++g+kktLvf++gr p g++tdW+mhey l evm.model.AsparagusV1_06.639 89 AGYWKSTGKDRDIRH-KNRTIGTKKTLVFHEGRPPCGKRTDWIMHEYYL 136 ***********.8999*************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MDALRVFSLP PGFGFHPTDV ELISHYLKGK LLGRKIDLDI IPEIDIYKHE PWDLPARCQV 60 PTRDSKWHFF ASRDKKYPNG SRSNRATAAG YWKSTGKDRD IRHKNRTIGT KKTLVFHEGR 120 PPCGKRTDWI MHEYYLNENE CKANPELKDA FVLCRITKRD GWMQDDVNIN EYVSPQSDNV 180 NSEIIQSENA SNCSNQPNEV ASVEVEKPSS PSMSAEELEA WFSELLVPTE PQLNTFGDVK 240 SETEVCYNLL SKS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	4e-68	NAC family protein