PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_06.903

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

CPP

Protein Properties

Length: 1041aa MW: 114606 Da PI: 6.6241

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_06.903	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.1	1.2e-15	640	678	4	42
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 k+CnCk+skClk+YC+Cfa g++Cse C C dC+N++e+ evm.model.AsparagusV1_06.903 640 KRCNCKRSKCLKLYCDCFAVGSFCSEACACIDCSNRTEH 678 89*********************************9886 PP
2	TCR	52.5	9.7e-17	724	763	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks ClkkYCeCf+ag+ Cs+ C+Ce+CkN+ evm.model.AsparagusV1_06.903 724 RHKRGCNCKKSLCLKKYCECFQAGVGCSSGCRCEGCKNTF 763 589***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1041 aa Download sequence
MTSSESDKPD PKSPPVQDSP IFGYVSSLSP INPVNARSIV QVYENVDIPS PQLVFKTPNF 60 SRSNLLGRSQ LLALNNVENN SPGYRNNTRE YSENVDVNGT SQPTREFVSH RDNECPSGDP 120 SPTQSFTSPS NCVDDFLADP SENGNCSSSS PEFCVKRACK DIEYDNASCC ENQTESLKED 180 LLRPHPCTSA ISTSKQTDDS LHSKRDSHTS DTLVNDSINH KESYLELHAA DMKKHTNKTA 240 VISFRGLYQT EEDVESMSMA AETMEIDKGL IAAQMGQVPK DVRDYTNAHS SDFIIWDRDN 300 SVFQGAIGSS SVSRANICDL SHDEKGNSTT SAFLCQGERE PKLQTTETCQ PNELDCTSQL 360 PRDFHEKIQT GNNNIKITVP PISTSAGNDL EDSIQHQRGK RKRLEFEAAD LSNRNSFNYT 420 TEASNLDLPI APLELESVGA SHAESNAVSS HKQVVHYTST NAPCRVSVRV DKSGQCKESL 480 VAAPRPAGIG LHLNSIGNAA STNYNSDMQL AERNAGLHGK SLSLDIEQAS KNSKSCLVSV 540 SLMHPQKFTF SAEKPLHYSG NERNQERQQG DQGFQQHHSS VNYHSPLAAK PLNSSAPLKH 600 MDHYMTPCNI KGLEEAKKSE ESTQTSPSKK RKRTPANGPK RCNCKRSKCL KLYCDCFAVG 660 SFCSEACACI DCSNRTEHEE IVREARQQIE SRNPLAFAPK VLLRVSDTPK GIGDDEPIPP 720 TSARHKRGCN CKKSLCLKKY CECFQAGVGC SSGCRCEGCK NTFGKKDEYE ISEVTVEHKR 780 PKEASLERDL SGELESIEVK GQITNAKRRH SRFSPLTPLL QSSMGNDLPK HHLPSSLFPS 840 PDSVASIVRS YESSDADLDA MQNDHNTEKV DPFSPGWDVF SDIYNLSPLL KTSVSPSAGS 900 SSAASKTREH KIFKFPQGST KISLGSLRWH NSPITPIPEF EESEFVRESD SNSGVPCNQE 960 DDTPDILKET RSPIKMVKSS SPNSKRVSPP HRILCSTSES PPPSGLRNVR KFILQSMPAF 1020 PPLTPYSKSN KEGTKEDEFT *

Sequence ? help Back to Top

Protein Sequence Length: 1041 aa Download sequence

MTSSESDKPD PKSPPVQDSP IFGYVSSLSP INPVNARSIV QVYENVDIPS PQLVFKTPNF  60
SRSNLLGRSQ LLALNNVENN SPGYRNNTRE YSENVDVNGT SQPTREFVSH RDNECPSGDP  120
SPTQSFTSPS NCVDDFLADP SENGNCSSSS PEFCVKRACK DIEYDNASCC ENQTESLKED  180
LLRPHPCTSA ISTSKQTDDS LHSKRDSHTS DTLVNDSINH KESYLELHAA DMKKHTNKTA  240
VISFRGLYQT EEDVESMSMA AETMEIDKGL IAAQMGQVPK DVRDYTNAHS SDFIIWDRDN  300
SVFQGAIGSS SVSRANICDL SHDEKGNSTT SAFLCQGERE PKLQTTETCQ PNELDCTSQL  360
PRDFHEKIQT GNNNIKITVP PISTSAGNDL EDSIQHQRGK RKRLEFEAAD LSNRNSFNYT  420
TEASNLDLPI APLELESVGA SHAESNAVSS HKQVVHYTST NAPCRVSVRV DKSGQCKESL  480
VAAPRPAGIG LHLNSIGNAA STNYNSDMQL AERNAGLHGK SLSLDIEQAS KNSKSCLVSV  540
SLMHPQKFTF SAEKPLHYSG NERNQERQQG DQGFQQHHSS VNYHSPLAAK PLNSSAPLKH  600
MDHYMTPCNI KGLEEAKKSE ESTQTSPSKK RKRTPANGPK RCNCKRSKCL KLYCDCFAVG  660
SFCSEACACI DCSNRTEHEE IVREARQQIE SRNPLAFAPK VLLRVSDTPK GIGDDEPIPP  720
TSARHKRGCN CKKSLCLKKY CECFQAGVGC SSGCRCEGCK NTFGKKDEYE ISEVTVEHKR  780
PKEASLERDL SGELESIEVK GQITNAKRRH SRFSPLTPLL QSSMGNDLPK HHLPSSLFPS  840
PDSVASIVRS YESSDADLDA MQNDHNTEKV DPFSPGWDVF SDIYNLSPLL KTSVSPSAGS  900
SSAASKTREH KIFKFPQGST KISLGSLRWH NSPITPIPEF EESEFVRESD SNSGVPCNQE  960
DDTPDILKET RSPIKMVKSS SPNSKRVSPP HRILCSTSES PPPSGLRNVR KFILQSMPAF  1020
PPLTPYSKSN KEGTKEDEFT *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	629	634	KKRKRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-56	CPP family protein