PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.1084
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GRAS
Protein Properties Length: 572aa    MW: 63137.6 Da    PI: 4.8048
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.1084genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS286.67.1e-881965682374
                           GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetsekn.....ss 75 
                                    v lL+++A+ +s++++ +a+ l+ r + ++s +g+p+qR++++f+ AL++r+ r++ ++ ++  +  e ++ +       
  evm.model.AsparagusV1_07.1084 196 VCLLMTAADKLSKQQFDRAEDLVRRCHVTSSRTGNPVQRVVHCFADALQERIDRETGKIPSKGsKGAEITTGEdvmkaIL 275
                                    669***************************************************88777666523333332223323222 PP

                           GRAS  76 eelaalkl....fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgsp 150
                                    ++ +         + + P+ ++s++ta qa+l+++++++++H iD++i++GlQW+ L+qaLa+R+  +  sl+iT+vg+ 
  evm.model.AsparagusV1_07.1084 276 TN-H---SvhliVNSTLPFTQVSQFTAVQAVLDSMSTAKKIHLIDLSIKHGLQWAILMQALATREtCPIDSLKITAVGA- 350
                                    22.2...13446999**************************************************44556*********. PP

                           GRAS 151 esgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLkl 230
                                         e +  +g+rL++fAe+l++pfef+++++ +l+dl++++++++ gE l + + l + ++l ++  le+    ++++
  evm.model.AsparagusV1_07.1084 351 ---LDEVVTIIGKRLSSFAESLNLPFEFRTVIVADLKDLTVDMFDLEGGEELGIWSDLVMNSMLVNPEGLEK----LMSV 423
                                    ...88***********************************************************88888888....**** PP

                           GRAS 231 vkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhe 310
                                    + +l+P+v+ v + ea +ns sF +rf+eal y+sa+fd+l+  + + ++ r+++E  ++++ i+ ++a+eg++r+ r+ 
  evm.model.AsparagusV1_07.1084 424 ICKLNPRVMAVLDVEAGLNSRSFINRFTEALFYFSAFFDCLDDLMEPSDRSRMMIEGDFFSQGIKCILAAEGSQRVIRQV 503
                                    ******************************************************************************** PP

                           GRAS 311 tlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                                      + Wr+ + ++G+ + +lse+   qa+l+l+k+  +d  +v+ + ++l+  Wk+ pL +vSaW+
  evm.model.AsparagusV1_07.1084 504 GIRVWRSFFARFGLIETELSESSLYQARLILKKFVkDDSCTVQRNGNALLTLWKGTPLHFVSAWK 568
                                    **********************************9888899**99*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    
MSNPSFPFDE NYSDDNFPLY KLVDDRSANF NGFFSSDNFG GGLDGLWSGN NFQPESPNVD  60
VASFPASNDL QSLSEFTAFD DAHFNAVSTV IESLQIPAVT ATEDPERSSV PATSLHRSKE  120
KSRQLDTEGT DDKQATIGAT VETGNALSTE EVVRIAAANF IQLSALVSGD PRKLGLPFGL  180
SYSNLTSDEI KNVDLVCLLM TAADKLSKQQ FDRAEDLVRR CHVTSSRTGN PVQRVVHCFA  240
DALQERIDRE TGKIPSKGSK GAEITTGEDV MKAILTNHSV HLIVNSTLPF TQVSQFTAVQ  300
AVLDSMSTAK KIHLIDLSIK HGLQWAILMQ ALATRETCPI DSLKITAVGA LDEVVTIIGK  360
RLSSFAESLN LPFEFRTVIV ADLKDLTVDM FDLEGGEELG IWSDLVMNSM LVNPEGLEKL  420
MSVICKLNPR VMAVLDVEAG LNSRSFINRF TEALFYFSAF FDCLDDLMEP SDRSRMMIEG  480
DFFSQGIKCI LAAEGSQRVI RQVGIRVWRS FFARFGLIET ELSESSLYQA RLILKKFVKD  540
DSCTVQRNGN ALLTLWKGTP LHFVSAWKFR H*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.15e-55GRAS family protein