PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.1103
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family CAMTA
Protein Properties Length: 139aa    MW: 16580.9 Da    PI: 9.6828
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.1103genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1163.63.5e-51211343116
                           CG-1   3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevly 82 
                                    + ++rwl+++ei++iL n+++++lt +++++p+ gs++L+n+  vr+frkDG++w+kkkdg tvrE+hekLK+g   vl 
  evm.model.AsparagusV1_07.1103  21 EARSRWLRSSEICEILRNHKRFNLTVDPPHKPPGGSFFLFNKNEVRNFRKDGHCWRKKKDGITVREAHEKLKIGKELVLD 100
                                    459***************************************************************************** PP

                           CG-1  83 cyYahseenptfqrrcywlLeeelekivlvhyle 116
                                    cyYah+e+n++f+rr+ywl +e+le+ivlvhy++
  evm.model.AsparagusV1_07.1103 101 CYYAHGEDNKNFRRRIYWLHDEKLENIVLVHYRD 134
                                    ********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MDSDKGRVLT CNLSNVYFVT EARSRWLRSS EICEILRNHK RFNLTVDPPH KPPGGSFFLF  60
NKNEVRNFRK DGHCWRKKKD GITVREAHEK LKIGKELVLD CYYAHGEDNK NFRRRIYWLH  120
DEKLENIVLV HYRDLSEF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.25e-52CAMTA family protein