PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.1246

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 165aa MW: 19090.6 Da PI: 6.7909

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.1246	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.5	3.1e-10	96	128	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +LA+ +gL+++q+ +WF N+R ++ evm.model.AsparagusV1_07.1246 96 PYPTEEEKSKLAEMTGLDQKQINNWFINQRKRH 128 8*****************************985 PP
2	ELK	31.4	4.2e-11	48	69	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK+ Ll+KYsgyL+sL++EF+ evm.model.AsparagusV1_07.1246 48 ELKEILLKKYSGYLSSLRKEFL 69 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MSVDDAPCNI SDSYFLDEAV GSSEGELSCG DVETSEGQDS GSRVADHELK EILLKKYSGY 60 LSSLRKEFLK KRKKGKLPKD ARLVLLDWWN THYRWPYPTE EEKSKLAEMT GLDQKQINNW 120 FINQRKRHWK PSEDMSYSDD LVNVMLLRIK LRQLYVSVGY FTLS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	64	73	LRKEFLKKRK
2	70	74	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	2e-32	TALE family protein