PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.1481

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

FAR1

Protein Properties

Length: 180aa MW: 20476 Da PI: 5.7228

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.1481	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.6	1.5e-21	42	130	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevt 79 +fYneYA + GFs+r+++ + ++g t+rtfv ke ++ +k++ + +r +r etrt+C a + +k+ + ++k+ v+ evm.model.AsparagusV1_07.1481 42 DFYNEYACSEGFSIRRDAYATD-KQGVLTSRTFVYCKESLQKADKRD-DLTRIPRGETRTNCGAIMGIKLVRrTDKYSVY 119 6*************986665.8899***9999999999988.99****************999*** PP FAR1 80 kleleHnHela 90 ++++eHnH+l evm.model.AsparagusV1_07.1481 120 RFSEEHNHPLI 130 *******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MLEANGILEE PVEENNNSLE RSKEDLKPKF FKEFDSEIAA YDFYNEYACS EGFSIRRDAY 60 ATDKQGVLTS RTFVYCKESL QKADKRDDLT RIPRGETRTN CGAIMGIKLV RRTDKYSVYR 120 FSEEHNHPLI SQESVHFMPS HRKITPSDDA FLDLTANSGL SPKSAFELMG QQARGILLC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-17	FAR1 family protein