PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.1607
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 144aa    MW: 15974.5 Da    PI: 9.9695
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.1607genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.30.000511233223
                                   EETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                                   +C+ C++ Fs++  L  H++ H
  evm.model.AsparagusV1_07.1607 12 PCTCCKRKFSTHQALGAHQKAH 33
                                   6*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MTPQNSTAND LPCTCCKRKF STHQALGAHQ KAHEIKQIIL QKKQPWSRAR RSHVGLCTSC  60
MGGSAFGRQV TSAIEQAYLM RLRQLAVLRR KNHSEEPGND DAAVAGVGWF SVIIIIIGAE  120
GTRFPTIVLL NYFSFFHEVL YIS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53600.14e-07C2H2 family protein