PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.1634

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 183aa MW: 21243.9 Da PI: 6.1411

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.1634	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.6	3.8e-07	82	105	8	30
HHHHHHHHHHHHHHHHHCTSCC.C CS HLH 8 rErrRRdriNsafeeLrellPk.a 30 Er RR+++N+ ++ LrellP+ + evm.model.AsparagusV1_07.1634 82 YERERREKLNKLYSSLRELLPEkD 105 59*******************944 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MLPLSPSNIV PDFEWQFEEQ MMHEFPCDDL FARYNFQETD TSHNASNSSP QPQDFEYDGT 60 QNSGDGNKKL QISMKKSCQH DYERERREKL NKLYSSLREL LPEKDKRIQM TEMMNSSSRI 120 FSGECHCSVK KRDSSXXXXX XRAGEQTTSG RAGNERTSSR ANTKIRESTK TIQRRVDEDD 180 ER*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41240.2	9e-08	bHLH family protein