PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.1636

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 246aa MW: 28691.9 Da PI: 8.1059

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.1636	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.3	1.4e-13	75	127	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hne Er RR+++N+ ++ LrellP+ + + kKls + ++ eYI +Lq evm.model.AsparagusV1_07.1636 75 KKSTHNEYERDRRKKLNKLYSSLRELLPEkD---QRKKLSIPCTIAHVLEYIPKLQ 127 689************************77...9999*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MLPLSPTTFP TFDWQLDQEH MIHEIPLQDL FASYNLNEGD ISHNSSISSP HLPDFEYEDI 60 EDSIIKTSKL SNSMKKSTHN EYERDRRKKL NKLYSSLREL LPEKDQRKKL SIPCTIAHVL 120 EYIPKLQKHI KRLQRKKEEL LSRVPSNDYS SICNKERMIN PVISAVFLSK KEIMIQICIL 180 NKQSAATPFS KVVNILEREG FRLLNATTLT THDDKTIYSL HLQAKEAMRM ENQNFFEQLV 240 NFLNE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56970.1	6e-32	bHLH family protein