PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.1651
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family SRS
Protein Properties Length: 160aa    MW: 16588.7 Da    PI: 4.3819
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.1651genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702806.2e-251164102154
                         DUF702 102 tsslPeevsseavfrcvrvssvdd.geeelaYqtavsigGhvfkGiLydqGlee 154
                                    ++slP +v+++avf+cvrv+sv+d ge+e+aYq+ v+igGhvfkG+LydqG +e
  evm.model.AsparagusV1_07.1651  11 KESLPGHVRAPAVFKCVRVTSVEDdGEDEYAYQAMVKIGGHVFKGFLYDQGSDE 64 
                                    467*******************9879*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MSCFLKDASF KESLPGHVRA PAVFKCVRVT SVEDDGEDEY AYQAMVKIGG HVFKGFLYDQ  60
GSDEGAGVDN SNNNANNNSN AIPNISELHL GGGSGAGAGG RSMVPATDMS SLLGDLDLTS  120
GTVYEVIGPL MMPPPLPLPS AAAPRQLCFS LTGLFSFTL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.15e-24SRS family protein