PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.1741
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HSF
Protein Properties Length: 254aa    MW: 29709.4 Da    PI: 6.7415
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.1741genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.91.1e-35251172103
                                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEE CS
                   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweF 81 
                                    Fl k+y++++d+ +++++sw e+ ++fvv+ + ef++++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF
  evm.model.AsparagusV1_07.1741  25 FLIKTYQLVDDPCTDHIVSWGEDDSTFVVWRPPEFSRDILPNYFKHNNFSSFVRQLNTYGFRKIVADR---------WEF 95 
                                    9****************************************************************999.........*** PP

                                    EESXXXXXXXXXXXXXXXXXXX CS
                   HSF_DNA-bind  82 khksFkkgkkellekikrkkse 103
                                    +++ F+kg+k+ll++i+r+k++
  evm.model.AsparagusV1_07.1741  96 ANDFFRKGEKHLLSEIHRRKTS 117
                                    *******************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MSFLVESCRE MLLPMESNKS VPAPFLIKTY QLVDDPCTDH IVSWGEDDST FVVWRPPEFS  60
RDILPNYFKH NNFSSFVRQL NTYGFRKIVA DRWEFANDFF RKGEKHLLSE IHRRKTSQIP  120
QQYFYQQQPP TLYNAHQDEI STNWIDSPLP SPNSTDSTSE FISALSEDNQ RLRRRNSLLL  180
SELTHMKKLY NDIIYFLQNH VSPVQLDNQR VANFSNGTSL KLMEESHDQN AVKLFGVPLH  240
GKKRLHHECE SLE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.12e-78HSF family protein