PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.2039
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GATA
Protein Properties Length: 242aa    MW: 26201.3 Da    PI: 8.4956
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.2039genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.95.2e-17144180135
                           GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                                    C+nCgt k  Tp++Rrgp g+++LCnaCGl+++ kg+
  evm.model.AsparagusV1_07.2039 144 CQNCGTPKgaTPMMRRGPAGPRSLCNACGLMWANKGT 180
                                    **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MAWLSAVEYS CAFVHRGGFT VFDCRPAERV QAVLLLLGGQ ELSPDFPGMT SPDNVHHRLP  60
NDITRLSTNP HRLASIMRYR EKRKNLCFDK KVLYEVRQDV ASRMKRHKGQ FASSKKNSEE  120
AVSPSSSGEH AQSNSQEETV SSFCQNCGTP KGATPMMRRG PAGPRSLCNA CGLMWANKGT  180
LRSPSQPSSS GIQNSPTNPT EQSDANGSDI GSNGHMFSAT SNGPESTMIA RIDASMEYAD  240
G*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.23e-55GATA family protein