PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.2313

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 216aa MW: 23879.8 Da PI: 8.2154

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.2313	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.7	2.3e-32	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH+ Fv+a++ LGG++kAtPk +l+lm++kgLt++hvkSHLQ+YR+ evm.model.AsparagusV1_07.2313 19 PRLRWTPELHRLFVHAIDTLGGQDKATPKLVLQLMNIKGLTISHVKSHLQMYRS 72 8****************************************************7 PP
2	Myb_DNA-binding	51.9	1.7e-16	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ l+v+a+ lGg t+k++ + m+ kg+t ++ks++q+y+ evm.model.AsparagusV1_07.2313 20 RLRWTPELHRLFVHAIDTLGGQdkaTPKLVLQLMNiKGLTISHVKSHLQMYR 71 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MGSFGRNGSV RQYNRSKVPR LRWTPELHRL FVHAIDTLGG QDKATPKLVL QLMNIKGLTI 60 SHVKSHLQMY RSMRNDISRQ DLHPTHDDVG FFPCSNLNPL PTLKSQGIYQ AVTLQYKYYD 120 YMQAMAMEKG DDHLFNFIEE SNSFKENGCQ LKADDDSSPS LSLSLNLNQG SNYASSASES 180 SCIVSSSSSP SSRKCSGFSS GCSINLDLSM SIFGS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	4e-33	G2-like family protein