PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.2374
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 200aa    MW: 22612.2 Da    PI: 10.1753
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.2374genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.31.2e-12251061496
                                    T-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                             B3  14 grlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                                    +rl+lp kf+++    +++k e    +l ++ g sW+v++  +  ++ y+ + GW++ ++a+ L  g f+vF++ g++ f
  evm.model.AsparagusV1_07.2374  25 NRLRLPTKFVTNVlatKEIKVE--SASLVNPIGASWNVEVHTNVDQELYIGGLGWSDLAHAHSLGLGYFLVFRYRGDMAF 102
                                    79********777977555555..59999***********6566655588889*********************999998 PP

                                    ..EEEE CS
                             B3  91 elvvkv 96 
                                       +++
  evm.model.AsparagusV1_07.2374 103 --DFRA 106
                                    ..5555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MRHPLQCASP RSPSFFRVLQ PGFINRLRLP TKFVTNVLAT KEIKVESASL VNPIGASWNV  60
EVHTNVDQEL YIGGLGWSDL AHAHSLGLGY FLVFRYRGDM AFDFRAFDLS TCEISYPSVS  120
QRVSKKLKQR VPVLVRVKEE DKRSNFSPES TVSCIRNKEK ELMKSNAIGG VRFEVELTSY  180
QLWKGRVVSN FILFIVPLS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.18e-15B3 family protein