PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.2519

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

YABBY

Protein Properties

Length: 78aa MW: 8842.25 Da PI: 8.7969

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.2519	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	51.3	4.8e-16	4	32	134	162
YABBY 134 keeiqrikasnPdishreafsaaaknWah 162 +eeiqrika+nP++ hreafs+aaknWa evm.model.AsparagusV1_07.2519 4 REEIQRIKAANPEMPHREAFSTAAKNWAK 32 7**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 78 aa Download sequence
MLHREEIQRI KAANPEMPHR EAFSTAAKNW AKCEPRGLIC STAEKDVTPK AIALEHEKTN 60 GLLMKSFDVF KQIEHRI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	1e-13	YABBY family protein