PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.268

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 251aa MW: 28155.8 Da PI: 7.6423

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.268	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.3	3.7e-05	189	220	18	54
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++ L++l+ + +K + a++L++A+e+Ik+L evm.model.AsparagusV1_07.268 189 HKITALQQLVSPY-----GKTDTASVLKEACEHIKDL 220 6788899999888.....9****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MLRFFEPEAE PRWSISTAPS DHYKCSRMRE DSILPLRSQA FLTATIGTSG QSRGESSRAS 60 AEFESNSSYN GDFLNISSQD CKSFQFESIA PLPALDQNPG QTSLTMNPME LRVSGFTSHH 120 DHALPESKKQ RNQLIAAHQI MDQRLMMGRE SKRCKAEQDD NNPQKLSMMA PTMKAPMVTN 180 VKKSQKLGHK ITALQQLVSP YGKTDTASVL KEACEHIKDL HQKIRMLSSP YFGGQTSIFF 240 QVDDDDHELR *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	2e-17	bHLH family protein