PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.2700

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 357aa MW: 40149.8 Da PI: 7.1613

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.2700	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.2	1.2e-51	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknra 77 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k++ +++wyfFs++dkky+tg+r+nra evm.model.AsparagusV1_07.2700 11 VPPGFRFHPTEEELLNYYLRKKVACEKIDL-DVIRDVDLNKLEPWDIQEKCRIgstPQNDWYFFSHKDKKYPTGTRTNRA 89 69**************************.9***********964443122456***************** PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 t++g+Wkatg+dk +++ + + +g++ktLvfykgrap+g+k+dW+mheyrl evm.model.AsparagusV1_07.2700 90 TAAGFWKATGRDKVIYT-SCRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 *************.7789*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MSIAVNGRSS VPPGFRFHPT EEELLNYYLR KKVACEKIDL DVIRDVDLNK LEPWDIQEKC 60 RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYTSCRR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD EHSDSHSFSN VSALIGETSN QEEGWVVCRV FKKKNLHKAM 180 DSSNNSSSIV TDAKTHLLLH SSSDGTLDQI LQAMSRSCKQ EKESFITTTN NHLRYLRPLD 240 TITSSNLNEM FLKLPALESP TISTTLADEI SPSFEHSCLS ETGLTEWAAL DGLVAWQLNG 300 QSTDSLKQLS CFDNPNFIYN NNNNNNNKSN DGGDGDLWSL ASSASDRISH VSHGSI*

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MSIAVNGRSS VPPGFRFHPT EEELLNYYLR KKVACEKIDL DVIRDVDLNK LEPWDIQEKC  60
RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYTSCRR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD EHSDSHSFSN VSALIGETSN QEEGWVVCRV FKKKNLHKAM  180
DSSNNSSSIV TDAKTHLLLH SSSDGTLDQI LQAMSRSCKQ EKESFITTTN NHLRYLRPLD  240
TITSSNLNEM FLKLPALESP TISTTLADEI SPSFEHSCLS ETGLTEWAAL DGLVAWQLNG  300
QSTDSLKQLS CFDNPNFIYN NNNNNNNKSN DGGDGDLWSL ASSASDRISH VSHGSI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-113	NAC family protein