PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.2749
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family E2F/DP
Protein Properties Length: 213aa    MW: 24109.5 Da    PI: 4.5774
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.2749genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP406.6e-1351911257
                        E2F_TDP 12 kflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealn 57
                                   +f+ l+e++e + v+l+++a++L    v  +rRRiYDi+NVLe+++
  evm.model.AsparagusV1_07.2749 51 NFVGLYESKEVESVCLDDAARRL---GV--ERRRIYDIVNVLESVG 91
                                   899**999999************...**..*************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSSLSSFDQD DESFEHTLLV VREVSFFKIP PRSSSGGYKC GEWLRVLWVF NFVGLYESKE  60
VESVCLDDAA RRLGVERRRI YDIVNVLESV GSKVVLWDLM PICVEFSTRC MEGGFDSEEP  120
DYEETHSIVI LPDYISLPFS SVELPENLWL NLTDGMIFCT NVKIFYGIGR DRDLRVLELP  180
RACKRAGWSS VLVVRSDARQ RGCSLISNSV AV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.14e-13E2F/DP family protein