PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.2765

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB

Protein Properties

Length: 192aa MW: 21833 Da PI: 9.6871

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.2765	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46	1.2e-14	14	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ ++ +G g+W++ ++ R++k+c++rw +yl evm.model.AsparagusV1_07.2765 14 KGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAV--RCGKSCRLRWINYL 59 79***************************9..**********97 PP
2	Myb_DNA-binding	58.5	1.5e-18	65	109	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEd+l+++++ +lG++ W++Ia +++ gRt++++k++w+++ evm.model.AsparagusV1_07.2765 65 RGNFTQEEDDLIINLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 109 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDDRLIAHIR AHGEGCWRSL PKAAVRCGKS CRLRWINYLR 60 PDLKRGNFTQ EEDDLIINLH SLLGNKWSLI AGRLPGRTDN EIKNYWNTHI RRKLLSRGXX 120 XTITTISFDK REEEKSSGSS TEESSAWSTN SHQIANRIPD LNLELRISPP FQSQPEPVKR 180 EIGLCLGTTT R*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	1e-78	MYB family protein