PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.3040

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TCP

Protein Properties

Length: 283aa MW: 31719.8 Da PI: 9.8765

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.3040	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	98.5	1.2e-30	44	157	2	109
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec......ea 75 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WL+++a+++i++l+ ++ +++ + + evm.model.AsparagusV1_07.3040 44 FGGKDRHSKVSTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLINAAQHEIDKLPPLQIPPEGFIqlppqvNR 123 689*************************************************************9999844444543355 PP TCP 76 esssssasnsssgkaaksaakskksqksaasaln 109 es + s s+s+++++ k+ +k+++++ + + n evm.model.AsparagusV1_07.3040 124 ESLVRSFSQSTQRDEPKEILREKENTTKGNDMAN 157 5555555544444444444455555555555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MINNRRDRDL QAKEEGDQKI PPTSSSRLWS GLKNPRIVRV SRAFGGKDRH SKVSTIRGLR 60 DRRVRLSVPT AIQLYDLQDR LGLNQPSKVV DWLINAAQHE IDKLPPLQIP PEGFIQLPPQ 120 VNRESLVRSF SQSTQRDEPK EILREKENTT KGNDMANAQV LPSHFSLLGS LSNTMPYTSY 180 YNLEAANAYL SQIGVRSSHS NEAQAMSIPS SRNLPLESQI VFCPPGIMPS MFQSNVTNPM 240 EFNAKQFGQL QMVNSVSQTP QSNLEINSLH LSSPQERPSS EF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	6e-47	TCP family protein