PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.3215

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bZIP

Protein Properties

Length: 380aa MW: 40907.3 Da PI: 5.0461

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.3215	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.5	4.4e-16	185	239	3	57
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++kr+rr+ +NRe+ArrsR+RK+a + eL v +L +eN+aL k+l ++ ++ evm.model.AsparagusV1_07.3215 185 DVKRARRMLSNRESARRSRRRKQAHLSELDAQVSQLRGENSALLKRLTDINLKYN 239 78******************************************99988877665 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MNRSPSEWFF EKFLEEEAAV AKSPNLNPNP DPGPNPNNPC PSSVVSSNFD DEIVEIKKPQ 60 ISAVGSVPPS TSSDPTAEVD PKEYAAMLKQ KLDLYCHAVA VARNSGIQPQ DSSVPESQSP 120 VSDSSQLRPQ APLSGGGSSG IPAIPILQNS GVQARPVTSG SSREQSDDDD LEGETEMTDN 180 MDPADVKRAR RMLSNRESAR RSRRRKQAHL SELDAQVSQL RGENSALLKR LTDINLKYNE 240 AAVDNRILKA DVETLRAKVK MAEDGVKRVT GASMFPTMSD MSSISMPFSA SPSEATSDAA 300 VPIHDDPNLF FPGPTHDHRR VNPNLPDIAS TSLNAPSMQR VASLEHLQNR ICGTPGSCGS 360 GSWDSAGWDP EISNSKNHK*

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MNRSPSEWFF EKFLEEEAAV AKSPNLNPNP DPGPNPNNPC PSSVVSSNFD DEIVEIKKPQ  60
ISAVGSVPPS TSSDPTAEVD PKEYAAMLKQ KLDLYCHAVA VARNSGIQPQ DSSVPESQSP  120
VSDSSQLRPQ APLSGGGSSG IPAIPILQNS GVQARPVTSG SSREQSDDDD LEGETEMTDN  180
MDPADVKRAR RMLSNRESAR RSRRRKQAHL SELDAQVSQL RGENSALLKR LTDINLKYNE  240
AAVDNRILKA DVETLRAKVK MAEDGVKRVT GASMFPTMSD MSSISMPFSA SPSEATSDAA  300
VPIHDDPNLF FPGPTHDHRR VNPNLPDIAS TSLNAPSMQR VASLEHLQNR ICGTPGSCGS  360
GSWDSAGWDP EISNSKNHK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	207	RRSRRRKQ
2	202	207	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	8e-49	bZIP family protein