PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.335

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WOX

Protein Properties

Length: 188aa MW: 21413.3 Da PI: 8.4881

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.335	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	47.2	3.8e-15	2	50	14	57
HHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 14 eLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +Lee++++ r+p+a+++++++++l +++ ++V++WFqN++a++++ evm.model.AsparagusV1_07.335 2 ILEEMYRSgVRTPNASQIQQITAHLsfygKIEGKNVFYWFQNHKARDRQ 50 8****99***********************************996 PP
2	Wus_type_Homeobox	95	6.2e-31	1	51	14	64
Wus_type_Homeobox 14 kiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +iLee+y+sG+rtPn+++iq+ita+L+ yGkie+kNVfyWFQN+kaR+rqk evm.model.AsparagusV1_07.335 1 MILEEMYRSGVRTPNASQIQQITAHLSFYGKIEGKNVFYWFQNHKARDRQK 51 69************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MILEEMYRSG VRTPNASQIQ QITAHLSFYG KIEGKNVFYW FQNHKARDRQ KLRRRLSRQH 60 HLLHGCSFNQ YPLQTPNVQL FHNLEEASLS PTYSHLQAPL HFLHQGVPDQ ETSQGMNLLS 120 KLEKGEASPP KMSHGYDYMM MMMMESSHDA HPCCKPLKTL DLFPTKSTGL KDECSTSNPS 180 SCSTSTN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	5e-24	WOX family protein