PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.3489

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 345aa MW: 39227.3 Da PI: 7.3664

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.3489	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160.3	7.6e-50	50	173	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80 lppGfrFhP+d+elv++yL + + ++++ + +vd++k+ePwdLp + + kewyfF rd+kyatg+r+nrat s evm.model.AsparagusV1_07.3489 50 LPPGFRFHPRDDELVCDYLVPADGTCEFPM---MVDVDLNKCEPWDLPDIACIGGKEWYFFNLRDRKYATGQRTNRATLS 126 79***************99876666666...99*********6555689********************* PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 gyWkatgkd+++++ kg+lvg++ktLvfy+grapkg+ktdWvmhe+r evm.model.AsparagusV1_07.3489 127 GYWKATGKDRNIVR-KGTLVGMRKTLVFYQGRAPKGKKTDWVMHEFRS 173 *********9.999**************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MCLDYCQLAR PLPNLLQLNE LSSSASQQRD KEHSHQRKNM SNLGMMEARL PPGFRFHPRD 60 DELVCDYLVP ADGTCEFPMM VDVDLNKCEP WDLPDIACIG GKEWYFFNLR DRKYATGQRT 120 NRATLSGYWK ATGKDRNIVR KGTLVGMRKT LVFYQGRAPK GKKTDWVMHE FRSESNGEPP 180 PRYSSKEDWV LCRVFYKSRA VLGVTPSRPP TCTQTSHVED TCSSSLPSLT ESFIPFNQAF 240 TPNPTTNIQT NNSLSTSFQQ VPCFSSYPQV ITTTKPQKYT EDLGSSCFNQ LLSMPSCDKE 300 VLKCVIDHFS KFEGDHHEDK NMTSSESYLT ESALSSSMWY PFQS*

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MCLDYCQLAR PLPNLLQLNE LSSSASQQRD KEHSHQRKNM SNLGMMEARL PPGFRFHPRD  60
DELVCDYLVP ADGTCEFPMM VDVDLNKCEP WDLPDIACIG GKEWYFFNLR DRKYATGQRT  120
NRATLSGYWK ATGKDRNIVR KGTLVGMRKT LVFYQGRAPK GKKTDWVMHE FRSESNGEPP  180
PRYSSKEDWV LCRVFYKSRA VLGVTPSRPP TCTQTSHVED TCSSSLPSLT ESFIPFNQAF  240
TPNPTTNIQT NNSLSTSFQQ VPCFSSYPQV ITTTKPQKYT EDLGSSCFNQ LLSMPSCDKE  300
VLKCVIDHFS KFEGDHHEDK NMTSSESYLT ESALSSSMWY PFQS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-87	NAC family protein