PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3516
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 87aa    MW: 9799.06 Da    PI: 9.3313
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3516genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.8e-0913531555
                                   HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                   +iN+ +++L+++lP+a + +s++ s +  L++++ YIksL+
  evm.model.AsparagusV1_07.3516 13 EINELISKLQSVLPEARRRNSGRASASKLLKETCSYIKSLR 53
                                   7**************88**********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MSSRRGARIS DEEINELISK LQSVLPEARR RNSGRASASK LLKETCSYIK SLRREVDDLS  60
DRLSELMNTM DSNSEQAEII RSLLRS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.17e-23bHLH family protein