PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3529
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 299aa    MW: 34280.7 Da    PI: 7.9961
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3529genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.74.7e-53221501128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk 79 
                                    l pGfrFhPtdeelv +yLk+kv++k+l + e i+++diyk++PwdLp  + +++ekewyfF++rd+ky++++r+nr+t 
  evm.model.AsparagusV1_07.3529  22 LLPGFRFHPTDEELVGFYLKRKVQQKPLAI-ELIRQLDIYKFDPWDLPsLAPTTGEKEWYFFCPRDRKYKNSSRPNRVTV 100
                                    579************************999.89***************556677999*********************** PP

                            NAM  80 sgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    +g+Wkatg+d++++s+ +++ +glkk+Lvfy+gra++g+ktdW+mheyrl
  evm.model.AsparagusV1_07.3529 101 AGFWKATGTDRPIYSSeGTRCIGLKKSLVFYRGRASRGTKTDWMMHEYRL 150
                                    ***************856667***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MSGFGLEHRK YRRDMEERNE VLLPGFRFHP TDEELVGFYL KRKVQQKPLA IELIRQLDIY  60
KFDPWDLPSL APTTGEKEWY FFCPRDRKYK NSSRPNRVTV AGFWKATGTD RPIYSSEGTR  120
CIGLKKSLVF YRGRASRGTK TDWMMHEYRL PTKVQPFDKS MHPNDSWAIC RIFKKSATMA  180
QRELNHSMAH LFHITENSAT LSNIPNAQGT RPPEFFPVLD FTSFSPSTHL NFSPEEINDV  240
KRASTNVNFG RPGADDALRV EEEDATMRNA GLGAAGAADF PFDLSWESPS CFYELDGE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.19e-95NAC family protein