PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3783
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 126aa    MW: 13884.5 Da    PI: 9.235
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3783genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.44.3e-1078118345
                                    SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
                Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                                     ++++E+ l ++  k+ G + W++Ia +++ gRt++++  +w 
  evm.model.AsparagusV1_07.3783  78 EFSEDEEILVAKMYKLIGQR-WSLIAGRIP-GRTAEEIEKYWT 118
                                    79****************99.*********.***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MAGLGLGAGR WPSAADERSL GFSSRHLRIF RARGSWETAA AGARWRRTSG CTDGLGPTAT  60
TRGRCAGEEK NEESKVLEFS EDEEILVAKM YKLIGQRWSL IAGRIPGRTA EEIEKYWTTR  120
YSNSE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.13e-18MYB_related family protein