PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3901
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 230aa    MW: 25318.8 Da    PI: 6.0564
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3901genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.49.3e-1275118754
                                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                     rE+ RRdr+N++f eL ++l +     ++K++Ka+iL  Av+ + +L
  evm.model.AsparagusV1_07.3901  75 SREKMRRDRLNDKFMELGSILEPG----NPKMDKAAILSDAVRMVTQL 118
                                    69******************9986....8**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MASPENSNWV LDYPLIDSIS VTGGDFGVPG NGFFWTPQGI NCTPSASMET SGNSVDSAVL  60
KEPGSKKRVK SVPSSREKMR RDRLNDKFME LGSILEPGNP KMDKAAILSD AVRMVTQLRS  120
EAQKLKDSNE SLQEKIKDLK SEKNELRDEK LRLKQEKENL EQQIKLLNSR PSFMPQPSVI  180
PTAFAAQSQG GGHKMMMPVI GYPGYPMWQF MPPADVDTSQ DAESCPPVA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-82bHLH family protein