PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.3911
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 147aa    MW: 16102.2 Da    PI: 4.7618
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.3911genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.51e-0758100255
                                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    r ++ e+ErrRR+++N+++++Lr+l+ k            ++L  A++YI++Lq
  evm.model.AsparagusV1_07.3911  58 RSKNLEAERRRRSKLNNRLFTLRSLMSKE-----------STLVDAIDYIQKLQ 100
                                    778889*******************9887...........8************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MPRYPRDCGA DFDAMDFVDS TAAMATVVEE EEAGGGGGGG EGFGDPAIVA DTGEARYRSK  60
NLEAERRRRS KLNNRLFTLR SLMSKESTLV DAIDYIQKLQ KRICDLKLEL SKLTDEDQEK  120
KGSASSTESI APPEIKLCPV QLLYHL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.19e-12bHLH family protein