PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.430
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 244aa    MW: 26449.2 Da    PI: 9.4731
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.430genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH444e-1457103454
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                    h+++E+rRR+riNs +++Lr+++P a    + K++Ka+ L ++++++k+L
  evm.model.AsparagusV1_07.430  57 VHSQAEKRRRERINSHLSTLRRMVPDA----NNKMDKAALLARVIDHVKDL 103
                                   599***********************9....99****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MESGALALDT ILMSGCENLP LLLPRPSNSG PPSVNKGVIS WPSSSSPEIV RSKALKVHSQ  60
AEKRRRERIN SHLSTLRRMV PDANNKMDKA ALLARVIDHV KDLKTRTSNI DKTLSIPAEE  120
NEIAIELAKE SENSATSTTG DFYMKASVSC DDRPDLFVSM MRAFHGLKLR TVGADITSLG  180
GRAQVVFVLC GGDQYGSNVS LRSLTESLKD ALGRIIEVDV GLTSVSSSKR QRLLQSYYSS  240
VSI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.19e-34bHLH family protein