PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.503
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family S1Fa-like
Protein Properties Length: 85aa    MW: 9326.04 Da    PI: 10.5229
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.503genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA127.24.9e-401884570
                          S1FA  5 kvea.kGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                                  k+ea kGlnPG+ivl+vv g++l+fl+gny+lyvyaqk+lPP+kkkP+skkkl+re+lkqGv++PGe
  evm.model.AsparagusV1_07.503 18 KEEAtKGLNPGVIVLIVVVGVVLLFLIGNYALYVYAQKTLPPKKKKPISKKKLRRERLKQGVSAPGE 84
                                  56667*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MDQDQFTFSE NAQGNIIKEE ATKGLNPGVI VLIVVVGVVL LFLIGNYALY VYAQKTLPPK  60
KKKPISKKKL RRERLKQGVS APGE*