PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.564
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 202aa    MW: 22511 Da    PI: 7.4401
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.564genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY666e-21112173259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
                                   +Dg++WrKYG K++ + ++pr YYrCt++   gC+++k+v+++ +edp +  +tY+ +H ++
  evm.model.AsparagusV1_07.564 112 NDGHQWRKYGEKKISNCKMPRCYYRCTHKddqGCQATKQVQQKdNEDPPIYMVTYNKQHSCK 173
                                   8***************************99999*******8752689************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MEILSRNEEG QVSVSAGVGD QPAVLGEGGE PDVHGGGGGR GFCGIVKKYL RGLNGNFTSN  60
ITLNLHSGTT ISYETANEGQ TCNTNGEKKN NKAKLQRSHL HSWTTTTRTP FNDGHQWRKY  120
GEKKISNCKM PRCYYRCTHK DDQGCQATKQ VQQKDNEDPP IYMVTYNKQH SCKTNFIYSE  180
EFEQFELIVE PPITDPCQLS L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.21e-19WRKY family protein