PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_07.805
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family Trihelix
Protein Properties Length: 120aa    MW: 13264.7 Da    PI: 9.0853
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_07.805genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.57.9e-0939694373
                      trihelix 43 ferspkqCkekwenlnkrykkikegekkrts 73
                                  +ers++qCk++we+l  +ykki+ +e ++++
  evm.model.AsparagusV1_07.805 39 LERSSNQCKKRWESLLSDYKKITIWEASNSA 69
                                  79************************99632 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MRGNSTTSYL NQMYNDHKEG TSNGNTSIIA SPPPTTPSLE RSSNQCKKRW ESLLSDYKKI  60
TIWEASNSAS AYGPYSSLKP GRRRQLHLPY SFDQQVFCSL DAVIKAQEAR IASSATDID*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.11e-11Trihelix family protein