PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_07.828

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 446aa MW: 49317.7 Da PI: 7.225

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_07.828	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.3	1.7e-33	138	192	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl evm.model.AsparagusV1_07.828 138 KPRLKWTPELHERFIEAVNQLGGADKATPKTVMRLMGIPGLTLYHLKSHLQKYRL 192 79****************************************************8 PP
2	Myb_DNA-binding	68	1.6e-21	140	191	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e++++av+qlGg t+kt++r mg g+tl+++ks++qky+ evm.model.AsparagusV1_07.828 140 RLKWTPELHERFIEAVNQLGGAdkaTPKTVMRLMGiPGLTLYHLKSHLQKYR 191 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MTPNVSMDSS NLFLSATKNL KCLSSNPLLS RGPNAESIPI ALTYIALDLD QDPLSIMNQP 60 QTSPFQFRNK TMFPRARDPS AEFLRTASES GKMYNHHHHQ GSNNLVSSRT AFPSERHLFL 120 QGGTVQGESG LVLSTDAKPR LKWTPELHER FIEAVNQLGG ADKATPKTVM RLMGIPGLTL 180 YHLKSHLQKY RLGKNLQSQA NTGSPKNAVG CTQVADRIPE DNGLAGNMNM GVQPNKTIHI 240 NEALQMQIEV QRRLHEQLEV QRHLQLRIEA QGKYLQSVLE KAQETLGKQN LGSAGLEAAK 300 VQLSELVSKV SNECFSSAFP GVEEISSLHT LQPHQAQLAD CSIDSCLTSC EGSQKDQEIH 360 NISIGLRAFH GNPPLYTQQT GDDMRLDQSQ SAWCEDLNDQ KMFSSTIVKE PERTIFSVPR 420 DPSILSMNIT PQREKEGSGR XXXXL*

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MTPNVSMDSS NLFLSATKNL KCLSSNPLLS RGPNAESIPI ALTYIALDLD QDPLSIMNQP  60
QTSPFQFRNK TMFPRARDPS AEFLRTASES GKMYNHHHHQ GSNNLVSSRT AFPSERHLFL  120
QGGTVQGESG LVLSTDAKPR LKWTPELHER FIEAVNQLGG ADKATPKTVM RLMGIPGLTL  180
YHLKSHLQKY RLGKNLQSQA NTGSPKNAVG CTQVADRIPE DNGLAGNMNM GVQPNKTIHI  240
NEALQMQIEV QRRLHEQLEV QRHLQLRIEA QGKYLQSVLE KAQETLGKQN LGSAGLEAAK  300
VQLSELVSKV SNECFSSAFP GVEEISSLHT LQPHQAQLAD CSIDSCLTSC EGSQKDQEIH  360
NISIGLRAFH GNPPLYTQQT GDDMRLDQSQ SAWCEDLNDQ KMFSSTIVKE PERTIFSVPR  420
DPSILSMNIT PQREKEGSGR XXXXL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-122	G2-like family protein