PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.1262
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 306aa    MW: 34058.6 Da    PI: 4.4336
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.1262genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.5e-102302701055
                                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    r+RR+riN+++  L+ l+P+      +K++ +++Le Av+Y+k Lq
  evm.model.AsparagusV1_08.1262 230 RKRRERINERLRILQNLVPNG-----TKVDISTMLEDAVRYVKFLQ 270
                                    9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MESLGAISEL NWNFADEFEV IMKQLFGAYP DLDEQNQEAS LEINPMFWSD QSAGSYSSLD  60
DLSSYWLGTS NANCTSTSSF FVSPEFIESV SHFTPEEQMS GSSTMITHEY QVEGLICSKD  120
DENEPNDDAT DTTSEAKRKL PEPESEIPTE SSKEKARVSV QVQKRLKSVK SKKAQKNNGA  180
SEETPSNASF SSEEETNVSH EENVGTGNSA KGKTRAGRGS ATDPQSLYAR KRRERINERL  240
RILQNLVPNG TKVDISTMLE DAVRYVKFLQ LQIKLLSSDD MWMYAPLAYN GMDIGLDLKI  300
PLSRQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-43bHLH family protein