PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.1302
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 165aa    MW: 17425.6 Da    PI: 8.2983
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.1302genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.5e-054062123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                                   +kC++Cgk Fs+   L  H ++H
  evm.model.AsparagusV1_08.1302 40 FKCTICGKAFSSYQALGGHKSSH 62
                                   89************999999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MDLKALTSQD GLLALCLITL ASKETDCRSS SSDDAMSLSF KCTICGKAFS SYQALGGHKS  60
SHRRPPTGLQ LTRVMPVHSG SSTGSGGAHQ CSVCYRSFAT GQALGGHKRC HYWDSSSSLS  120
VSGSGLGSSI RDFDLNLPAV VEFWGVEDGE EVQSPHPSKK LRKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04340.19e-30C2H2 family protein