PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.138

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 347aa MW: 37825.2 Da PI: 7.8847

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.138	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.2	3.3e-32	169	222	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ evm.model.AsparagusV1_08.138 169 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 222 9****************************************************7 PP
2	Myb_DNA-binding	48.7	1.7e-15	170	221	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ evm.model.AsparagusV1_08.138 170 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 221 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MELFPVQPDL SLQISPPNPK PTSNDHPHMD LTDHHHHHHL GFWTKPTKDL GTDIDLSLST 60 SIPTPGYQTH SAHLAHLAHF HHHHRLHDHG AAGYGAANAS PCLNGGSQAE MGFLRPIRGI 120 PVYAAQAHFY DSSNANNMSR LSSPSPSSTS SSRFFPRGIV PVKRSMRAPR MRWTTTLHAR 180 FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY RTVKNTNAPA ASSGQSDGFE 240 NGSAGEISDD NSVDVQCIMG SQSSIQRLGM NQGANNQYGL WSNSSSRGSW INGKPRDSTI 300 GSKQCFEETQ SKSMEILSDL NSSCLSAEAV SPKRPNLEFT LGIMPH*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MELFPVQPDL SLQISPPNPK PTSNDHPHMD LTDHHHHHHL GFWTKPTKDL GTDIDLSLST  60
SIPTPGYQTH SAHLAHLAHF HHHHRLHDHG AAGYGAANAS PCLNGGSQAE MGFLRPIRGI  120
PVYAAQAHFY DSSNANNMSR LSSPSPSSTS SSRFFPRGIV PVKRSMRAPR MRWTTTLHAR  180
FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY RTVKNTNAPA ASSGQSDGFE  240
NGSAGEISDD NSVDVQCIMG SQSSIQRLGM NQGANNQYGL WSNSSSRGSW INGKPRDSTI  300
GSKQCFEETQ SKSMEILSDL NSSCLSAEAV SPKRPNLEFT LGIMPH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-53	G2-like family protein