PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.1388
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 137aa    MW: 14978.8 Da    PI: 9.7181
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.1388genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.31.3e-2285136254
                                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES CS
                           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYeg 54 
                                    +DgynWrKYGqK+v++s+ +rsYY+Ct  +C +kkkv+r+  d++ ++i+Y+g
  evm.model.AsparagusV1_08.1388  85 SDGYNWRKYGQKQVQSSDRSRSYYKCTNVTCFSKKKVKRCP-DGQETKIIYRG 136
                                    7****************************************.*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MTHQALLATV TAQAQMQLQA ARPSSSEALP GPSPEPASIN LAPLQQRPSP VSEDNISTPE  60
PMQPPPSDHK SEAQSTQIVV KTSSSDGYNW RKYGQKQVQS SDRSRSYYKC TNVTCFSKKK  120
VKRCPDGQET KIIYRG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.18e-20WRKY family protein