PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.1598

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB_related

Protein Properties

Length: 597aa MW: 66959.7 Da PI: 4.3293

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.1598	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.6	2.9e-08	335	382	3	47
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 WT+eE++l+ d+v+ + W+ +r ++ ++ k+++s+++++ evm.model.AsparagusV1_08.1598 335 GWTEEEEQLFRDVVASNPASlgknFWDDLPRVFP-SKSSKELVSYYFNV 382 5***********9876666666******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence
MVFKHNKLPF DHDDSLQLSF QHMTELDYGD QFASSVHRYI PEKQQFADGV STRGNFKLQN 60 VDAVNSDGNY GFTNDKTSSL PEVMRSDDET ARLESSKRPF DDDENLVVAV KRTRQLDGNF 120 LSFGSTCEQE SLIASLSDTE FKDGKDAAVS QTAKDSHGSN FCFPWFSYRT NDESRLETPV 180 QLSFFPGYYE DYHWPVRFNR VEESESLVFN YPPRKRVAIG QGHQAIIPAW RSKSFPDSCR 240 DGPGASTSAG HILTDDDLGD KWTGHCVMPM PESTSLSLVV SLGHSKFDCC CLDEGSIRCV 300 RQHVMEAREE LRSILGHERF VDLGLCDMGE DATLGWTEEE EQLFRDVVAS NPASLGKNFW 360 DDLPRVFPSK SSKELVSYYF NVFMLRKRAE QNRSDPLNVD SDNDEWQESD NCEFGFTRKD 420 EEDDSAVESP ADVAAEDNGV VGDGLEDIHE DAEEDYCEHE DYGISAGGVG DDKSIFSSRK 480 QHKGLHTHDS IGEDQEVHDD SCTSYEGQHN SNDSSGGRGD VLEGDHGNLH PEYRNEGVSG 540 MTDHDLVVGH YDSKPWEIGY FHGFDKGLDF LPTCNVIEEV CGHESWEKSR EGNGVS*

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence

MVFKHNKLPF DHDDSLQLSF QHMTELDYGD QFASSVHRYI PEKQQFADGV STRGNFKLQN  60
VDAVNSDGNY GFTNDKTSSL PEVMRSDDET ARLESSKRPF DDDENLVVAV KRTRQLDGNF  120
LSFGSTCEQE SLIASLSDTE FKDGKDAAVS QTAKDSHGSN FCFPWFSYRT NDESRLETPV  180
QLSFFPGYYE DYHWPVRFNR VEESESLVFN YPPRKRVAIG QGHQAIIPAW RSKSFPDSCR  240
DGPGASTSAG HILTDDDLGD KWTGHCVMPM PESTSLSLVV SLGHSKFDCC CLDEGSIRCV  300
RQHVMEAREE LRSILGHERF VDLGLCDMGE DATLGWTEEE EQLFRDVVAS NPASLGKNFW  360
DDLPRVFPSK SSKELVSYYF NVFMLRKRAE QNRSDPLNVD SDNDEWQESD NCEFGFTRKD  420
EEDDSAVESP ADVAAEDNGV VGDGLEDIHE DAEEDYCEHE DYGISAGGVG DDKSIFSSRK  480
QHKGLHTHDS IGEDQEVHDD SCTSYEGQHN SNDSSGGRGD VLEGDHGNLH PEYRNEGVSG  540
MTDHDLVVGH YDSKPWEIGY FHGFDKGLDF LPTCNVIEEV CGHESWEKSR EGNGVS*