PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.1635
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 123aa    MW: 13683.8 Da    PI: 8.3236
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.1635genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.90.000236731355
                                   HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                                   R+ i ++  eLre++P+ a      K s  + Lek+++Y+  Lq
  evm.model.AsparagusV1_08.1635 36 RQMIMDRVKELREIVPNgA------KCSIDALLEKTIKYMLFLQ 73
                                   566778999********66......99999***********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MQGESSYLPP FGKAEGLGCS SGARPGENPR PRPKDRQMIM DRVKELREIV PNGAKCSIDA  60
LLEKTIKYML FLQSVAKHAD TLKDIGEPKA ILLHANGSKE YHFTYLTWTR VSDCDMCMSF  120
AF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.13e-28bHLH family protein