PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.1783

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 380aa MW: 42623.3 Da PI: 4.5956

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.1783	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	48.9	2.1e-15	1	71	58	128
NAM 58 wyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +yfFs+r+ +++++kr nr++ g+W+ + d+++++ ++e++g ++ L+f +g+++k + dW+mhe++l evm.model.AsparagusV1_08.1783 1 MYFFSPRHPTSTSSKRVNRTAGCGFWHGSAGDTAIMV-GSEVIGYRTQLTFKtRGKEKKKINGDWIMHEFHL 71 5**********************************.9********9778999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MYFFSPRHPT STSSKRVNRT AGCGFWHGSA GDTAIMVGSE VIGYRTQLTF KTRGKEKKKI 60 NGDWIMHEFH LHSSSDDTVF DDMVLCRIYM KKVKKSSQTN EQEDAISVPA GEQEAVAEGH 120 RVMKRKRADH HEMGTYGVVY NKSSDQNASS LPKLPPLPSF EESNVQSDMC CVNVAVFDEK 180 QKNEEEKEGR MLVKRMRVDE NESLVADCSE KRKSVPANTE PSSLLLLEDA HALVSYGDME 240 DISSLTLDVG SIVVSDSELS EAQRGLEQWL SEEPEQHKCW ITVNNERGNY EEENNAESTI 300 PLSPSNEGLQ ANLHLTNGLC ATPPQEDDMY FDISDFRFLL SPTDEGQSSS LLESNKESEG 360 FDLLTSDMTW DRLLQRGEK*

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MYFFSPRHPT STSSKRVNRT AGCGFWHGSA GDTAIMVGSE VIGYRTQLTF KTRGKEKKKI  60
NGDWIMHEFH LHSSSDDTVF DDMVLCRIYM KKVKKSSQTN EQEDAISVPA GEQEAVAEGH  120
RVMKRKRADH HEMGTYGVVY NKSSDQNASS LPKLPPLPSF EESNVQSDMC CVNVAVFDEK  180
QKNEEEKEGR MLVKRMRVDE NESLVADCSE KRKSVPANTE PSSLLLLEDA HALVSYGDME  240
DISSLTLDVG SIVVSDSELS EAQRGLEQWL SEEPEQHKCW ITVNNERGNY EEENNAESTI  300
PLSPSNEGLQ ANLHLTNGLC ATPPQEDDMY FDISDFRFLL SPTDEGQSSS LLESNKESEG  360
FDLLTSDMTW DRLLQRGEK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	2e-18	NAC family protein