PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.187
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 128aa    MW: 14359.2 Da    PI: 12.5439
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.187genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.21.9e-15591085099
                                   E..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                            B3  50 liyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                                   ++y+++s++yv+tkGW++Fvk+++L+ gD+v F++   ++ +l++ ++r+
  evm.model.AsparagusV1_08.187  59 YSYWNSSQSYVMTKGWSRFVKDKRLDGGDTVSFSRAVANSNRLFIDWRRA 108
                                   889*******************************8766888899999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MFEKVVTPAR RRQAQPPRHP EAARRALLPA ATPPPTTPRA GSSSTSRRAP PADRGGSAYS  60
YWNSSQSYVM TKGWSRFVKD KRLDGGDTVS FSRAVANSNR LFIDWRRARR LWSRARWSPR  120
GPPRGRP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107114RARRLWSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61970.17e-20B3 family protein